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Lbys_2979 Lbys_2979 Lbys_2976 Lbys_2976 Lbys_2977 Lbys_2977 Lbys_2978 Lbys_2978 Lbys_2980 Lbys_2980 Lbys_2974 Lbys_2974 Lbys_2975 Lbys_2975 Lbys_2786 Lbys_2786 Lbys_3393 Lbys_3393 Lbys_2981 Lbys_2981 Lbys_2972 Lbys_2972
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Lbys_2979Multisubunit sodium/proton antiporter, MrpF subunit; InterPro IPR007208; KEGG: gfo:GFO_3558 putative monovalent cation/H+ antiporter subunit F; PFAM: multiple resistance and pH regulation protein F; SPTR: CPA3 family monovalent cation:proton (H+) antiporter-3 subunit G; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); Membrane transport protein MerF; TC 2.A.63.1. (88 aa)    
Predicted Functional Partners:
Lbys_2976
Multisubunit sodium/proton antiporter, MrpC subunit; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: gfo:GFO_3555 putative monovalent cation/H+ antiporter subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: CPA3 family monovalent cation:proton (H+) antiporter-3 subunit C; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; TC 2.A.63.1.
 
 
 0.999
Lbys_2977
Multisubunit sodium/proton antiporter, MrpD subunit; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750:IPR003918; KEGG: gfo:GFO_3556 Na(+)/H(+) antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Na(+)/H(+) antiporter subunit D; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TC 2.A.63.1.
 
 
 0.999
Lbys_2978
Multisubunit sodium/proton antiporter, MrpE subunit; COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: gfo:GFO_3557 putative monovalent cation/H+ antiporter subunit E; PFAM: cation antiporter; SPTR: CPA3 family monovalent cation:proton (H+) antiporter-3 subunit E; PFAM: Na+/H+ ion antiporter subunit; TC 2.A.63.1.
 
 
 0.999
Lbys_2980
Multisubunit sodium/proton antiporter, MrpG subunit; COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: gfo:GFO_3559 Na(+)/H(+) antiporter subunit G; PFAM: Na+/H+ antiporter subunit; SPTR: CPA3 family monovalent cation:proton (H+) antiporter-3 subunit G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; TC 2.A.63.1.
 
 
 0.999
Lbys_2974
Multisubunit sodium/proton antiporter, MrpA subunit; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001516:IPR001750:IPR003916; KEGG: zpr:ZPR_4510 putative monovalent cation/H+ antiporter subunit A; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Monovalent cation/H+ antiporter subunit A; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TC 2.A.63.1.
 
 
 0.998
Lbys_2975
Multisubunit sodium/proton antiporter, MrpB subunit; InterPro IPR007182; KEGG: zpr:ZPR_4509 Na(+)/H(+) antiporter subunit B; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: CPA3 family monovalent cation:proton (H+) antiporter-3; PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; TC 2.A.63.1.
 
 
 0.996
Lbys_2786
COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003916:IPR018393:IPR001516:IPR001750:IPR 003945; KEGG: dfe:Dfer_3898 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreduct [...]
  
 
 0.880
Lbys_3393
Proton-translocating NADH-quinone oxidoreductase, chain L; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003916:IPR001516:IPR001750:IPR003945; KEGG: sli:Slin_4909 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (compl [...]
  
 
 0.880
Lbys_2981
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR006664:IPR006690; KEGG: gme:Gmet_2727 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB; PFAM: Bacterial protein of unknown function (DUF937); OmpA family.
       0.554
Lbys_2972
Hydroxymethylglutaryl-CoA lyase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR006162; KEGG: gfo:GFO_2517 hydroxymethylglutaryl-CoA lyase-like protein; PFAM: pyruvate carboxyltransferase; PRIAM: Hydroxymethylglutaryl-CoA lyase; SPTR: Hydroxymethylglutaryl-CoA lyase like protein; PFAM: HMGL-like.
       0.509
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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